Category Archives: Uncategorized

Kitware’s Contribution to the OSTP RFI on publicly funded data: the “Open Source Way”

The US government (OSTP) has recently issued an RFI on Open Access to data resulting from publicly funded research.   The deadline for responding to the White House RFI on OA to US federally funded research has been extended to … Continue reading

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Panton Discussion #4: video of Iain Hrynaszkiewicz of BioMedCentral on Open Data, etc.

We have now edited and converted the Panton Discussion with IainH – it’s at http://vimeo.com/34555054. The full video runs for 28 minutes, so we have given a TOC with start times if you want to jump to particular topics. In … Continue reading

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Semantic Physical Science Workshop

We (Charlotte Bolton and I) are preparing the material for the Semantic Physical Science Workshop in January (10/12). A major feature of this is our Jumbo-Converters which convert legacy log files to semantic CML. To do that we are cleaning … Continue reading

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Videos from BiomedCentral: IainH and Gulliver Turtle (Panton #4 and #5) and thanks to Musopen

I have spent the last days on and off editing the material that Laura Newman (OKFN) and I collected from BiomedCentral – interviewing Iain Hrynaszkiewicz and also Gulliver Turtle. Iain has got the (slightly edited) video/audio and hoped to let … Continue reading

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Panton Discussions #4 and #5

Yesterday Laura Newman (OKF) and I met with Iain Hrynaszkiewicz of BiomedCentral and recorded a Panton discussion. Panton discussions are irregular discussions with figures in the Open world and have traditionally taken place in the Panton Arms in Cambridge, where … Continue reading

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The Open Access Movement is disorganized; this must not continue

I am going to have to reply to an article by Stevan Harnad (http://openaccess.eprints.org/index.php?/archives/862-guid.html ) where he argues inter alia that gratisOA (e.g. through Green, CC-restricted) rather than libreOA (e.g. through Gold, or CC-BY) should be adopted because: “Note that … Continue reading

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LBM2011 Singapore; a milestone in Text-mining and Natural Language Processing, OSCAR, OPSIN, ChemicalTagger

Yesterday I gave an invited plenary lecture at http://lbm2011.biopathway.org/ – The Fourth International Symposium on Languages in Biology and Medicine (LBM 2011) Nanyang Technological University, Singapore .14th and 15th December, 2011 The meeting was on Natural Language Processing – using … Continue reading

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Workshop and Symposium on Semantic Physical Science

We are delighted to announce that we are running a Workshop and Symposium on Semantic Physical Science (see below). This will explore how to use physical scientific data in semantic form and will explore: creation by humans and machines, specifications … Continue reading

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JISC/OKFN/SWAT4LS Hackathon: Bibsoup and disease video

This weeks’ hackathon showed how much could be accomplished in a (short) day-and-a-half. I’ve already given a brief overview but here I discuss our project – Open Research Reports and disease – in detail. David Shotton and Tanya gray introduced … Continue reading

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The hackathon was a great success (Open Research Reports, SWAT4LS, JISC, OKFN, Open Bibliography/BibSoup …)

The 1.5 day hackathon prequel to the SWAT4LS workshop was a great success – at least all the 30+ people there thought so. This is just a brief report and thanks. First enormous thanks to Andrea Splendiani and Mahendra Mahey … Continue reading

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